WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:W08D2.1 Sequence Name  W08D2.1
Length (nt)  1182   Chromosome Location  IV: 9813183-9813278
Chromosome . Primary Identifier  IV Chromosome Location . Start  9813183
Chromosome Location . End  9813278
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08D2.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25152 EGL-20 45.2 393 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00009266
WBRNAi00089852
WBRNAi00101394
WBRNAi00054972
WBRNAi00097716
WBRNAi00091575
WBRNAi00027854
WBRNAi00101702
WBRNAi00065340
WBRNAi00098910
WBRNAi00070194
WBRNAi00101560
WBRNAi00101562
WBRNAi00101561
WBRNAi00101342
WBRNAi00024206
WBRNAi00101445
WBRNAi00089925
WBRNAi00090085
WBRNAi00090243
WBRNAi00101486
WBRNAi00101691
WBRNAi00101686
WBRNAi00101696

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W08D2.1 9813183 9813278 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001188 egl-20 W08D2.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:W08D2.1 9813183 9813278 -1
CDS:W08D2.1 9813605 9813705 -1
CDS:W08D2.1 9813765 9813891 -1
CDS:W08D2.1 9814011 9814154 -1
CDS:W08D2.1 9814201 9814371 -1
CDS:W08D2.1 9814421 9814560 -1
CDS:W08D2.1 9814960 9815042 -1
CDS:W08D2.1 9815101 9815180 -1
CDS:W08D2.1 9815234 9815366 -1
CDS:W08D2.1 9815415 9815521 -1

1 Sequence

Length
1182

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W08D2.1.3 W08D2.1.3 1925   IV: 9812357-9815532
Transcript:W08D2.1.1 W08D2.1.1 1873   IV: 9812418-9815526
Transcript:W08D2.1.2 W08D2.1.2 1950   IV: 9812420-9815526