WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E12.9.1 Sequence Name  C47E12.9.1
Length (nt)  650   Chromosome Location  IV: 9974692-9975484
Chromosome . Primary Identifier  IV Chromosome Location . Start  9974692
Chromosome Location . End  9975484 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E12.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008152 C47E12.9 C47E12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E12.9 C47E12.9 615   IV: 9974703-9974837

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47E12.9.1 9974692 9975484 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139529   146   IV: 9974692-9974837 Caenorhabditis elegans
Exon139530   78   IV: 9974889-9974966 Caenorhabditis elegans
Exon139531   192   IV: 9975012-9975203 Caenorhabditis elegans
Exon139532   234   IV: 9975251-9975484 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47E12.9.1 9974692 9975484 1

1 Sequence

Length
650

1 Sequence Ontology Term

Identifier Name Description
transcript