WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01B6.7.1 Sequence Name  W01B6.7.1
Length (nt)  966   Chromosome Location  IV: 10084439-10085451
Chromosome . Primary Identifier  IV Chromosome Location . Start  10084439
Chromosome Location . End  10085451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01B6.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000593 col-2 W01B6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01B6.7 W01B6.7 906   IV: 10084485-10085110

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01B6.7.1 10084439 10085451 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon139907   672   IV: 10084439-10085110 Caenorhabditis elegans
Exon139909   294   IV: 10085158-10085451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01B6.7.1 10084439 10085451 -1

1 Sequence

Length
966

1 Sequence Ontology Term

Identifier Name Description
transcript