WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:C04G2.1a Sequence Name  C04G2.1a
Length (nt)  531   Chromosome Location  IV: 10088483-10088560
Chromosome . Primary Identifier  IV Chromosome Location . Start  10088483
Chromosome Location . End  10088560
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04G2.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05211 TTR-39, isoform a 19.7 176 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00039655
WBRNAi00010144
WBRNAi00028456

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04G2.1a 10088483 10088560 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007304 ttr-39 C04G2.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04G2.1a 10088483 10088560 -1
CDS:C04G2.1a 10088603 10088796 -1
CDS:C04G2.1a 10089586 10089844 -1

1 Sequence

Length
531

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04G2.1a.1 C04G2.1a.1 680   IV: 10088367-10089877