WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T14G10.5a.1 Sequence Name  T14G10.5a.1
Length (nt)  2831   Chromosome Location  IV: 10152338-10155636
Chromosome . Primary Identifier  IV Chromosome Location . Start  10152338
Chromosome Location . End  10155636 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011775 copg-1 T14G10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.5a T14G10.5a 2613   IV: 10152352-10153073

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.5a.1 10152338 10155636 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140072   736   IV: 10152338-10153073 Caenorhabditis elegans
Exon140076   108   IV: 10153124-10153231 Caenorhabditis elegans
Exon140079   1135   IV: 10153278-10154412 Caenorhabditis elegans
Exon140084   270   IV: 10154463-10154732 Caenorhabditis elegans
Exon140089   329   IV: 10154783-10155111 Caenorhabditis elegans
Exon140096   253   IV: 10155384-10155636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T14G10.5a.1 10152338 10155636 1

1 Sequence

Length
2831

1 Sequence Ontology Term

Identifier Name Description
transcript