WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E8.1e.1 Sequence Name  K11E8.1e.1
Length (nt)  2578   Chromosome Location  IV: 10324317-10348957
Chromosome . Primary Identifier  IV Chromosome Location . Start  10324317
Chromosome Location . End  10348957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E8.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006779 unc-43 K11E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E8.1e K11E8.1e 1602   IV: 10324996-10325125

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1e.1 10324317 10348957 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon140715   809   IV: 10324317-10325125 Caenorhabditis elegans
Exon140727   109   IV: 10325970-10326078 Caenorhabditis elegans
Exon140750   92   IV: 10326274-10326365 Caenorhabditis elegans
Exon140771   76   IV: 10326569-10326644 Caenorhabditis elegans
Exon140811   105   IV: 10329097-10329201 Caenorhabditis elegans
Exon140831   43   IV: 10334127-10334169 Caenorhabditis elegans
Exon140843   153   IV: 10336112-10336264 Caenorhabditis elegans
Exon140850   84   IV: 10337632-10337715 Caenorhabditis elegans
Exon140864   123   IV: 10337797-10337919 Caenorhabditis elegans
Exon140878   95   IV: 10337971-10338065 Caenorhabditis elegans
Exon140892   184   IV: 10338114-10338297 Caenorhabditis elegans
Exon140906   73   IV: 10338486-10338558 Caenorhabditis elegans
Exon140926   66   IV: 10338857-10338922 Caenorhabditis elegans
Exon140943   210   IV: 10338973-10339182 Caenorhabditis elegans
Exon140961   211   IV: 10340110-10340320 Caenorhabditis elegans
Exon140976   72   IV: 10340485-10340556 Caenorhabditis elegans
Exon140988   73   IV: 10348885-10348957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11E8.1e.1 10324317 10348957 -1

1 Sequence

Length
2578

1 Sequence Ontology Term

Identifier Name Description
transcript