WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R11A8.4a Sequence Name  R11A8.4a
Length (nt)  1824   Chromosome Location  IV: 10363486-10363614
Chromosome . Primary Identifier  IV Chromosome Location . Start  10363486
Chromosome Location . End  10363614
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11A8.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06302 SIR-2.1, isoform a 68.7 607 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00051766
WBRNAi00051767
WBRNAi00110205
WBRNAi00111077
WBRNAi00017738
WBRNAi00081434
WBRNAi00091993
WBRNAi00089713
WBRNAi00089716
WBRNAi00109090
WBRNAi00089714
WBRNAi00089715
WBRNAi00081448
WBRNAi00091913
WBRNAi00081444
WBRNAi00081431
WBRNAi00109094
WBRNAi00081436
WBRNAi00081440
WBRNAi00113792
WBRNAi00113686
WBRNAi00109116

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R11A8.4a 10363486 10363614 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004800 sir-2.1 R11A8.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:R11A8.4a 10363486 10363614 -1
CDS:R11A8.4a 10363761 10363955 -1
CDS:R11A8.4a 10364044 10364925 -1
CDS:R11A8.4a 10365380 10365664 -1
CDS:R11A8.4a 10365721 10365849 -1
CDS:R11A8.4a 10365921 10366070 -1
CDS:R11A8.4a 10366135 10366188 -1

1 Sequence

Length
1824

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R11A8.4a.1 R11A8.4a.1 2033   IV: 10363318-10366229