WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F01D4.6a Sequence Name  F01D4.6a
Length (nt)  966   Chromosome Location  IV: 10459090-10459157
Chromosome . Primary Identifier  IV Chromosome Location . Start  10459090
Chromosome Location . End  10459157
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01D4.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27422 MEC-3, isoform a 37.1 321 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043722
WBRNAi00012719
WBRNAi00084972
WBRNAi00115820

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F01D4.6a 10459090 10459157 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003167 mec-3 F01D4.6 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F01D4.6a 10459090 10459157 -1
CDS:F01D4.6a 10459867 10460080 -1
CDS:F01D4.6a 10460124 10460237 -1
CDS:F01D4.6a 10460310 10460561 -1
CDS:F01D4.6a 10460863 10460935 -1
CDS:F01D4.6a 10460986 10461101 -1
CDS:F01D4.6a 10461243 10461293 -1
CDS:F01D4.6a 10461689 10461766 -1

1 Sequence

Length
966

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F01D4.6a.1 F01D4.6a.1 1341   IV: 10458816-10461867