WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07G12.1b Sequence Name  T07G12.1b
Length (nt)  627   Chromosome Location  IV: 10526142-10526205
Chromosome . Primary Identifier  IV Chromosome Location . Start  10526142
Chromosome Location . End  10526205
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07G12.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43912 CAL-4, isoform b 23.5 208 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052782
WBRNAi00018388
WBRNAi00076661
WBRNAi00035317

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07G12.1b 10526142 10526205 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000288 cal-4 T07G12.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07G12.1b 10526142 10526205 1
CDS:T07G12.1b 10529493 10529811 1
CDS:T07G12.1b 10529976 10530111 1
CDS:T07G12.1b 10530212 10530319 1

1 Sequence

Length
627

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07G12.1b.1 T07G12.1b.1 1101   IV: 10521406-10530597
Transcript:T07G12.1b.2 T07G12.1b.2 1031   IV: 10521536-10530592