WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:R102.5b Sequence Name  R102.5b
Length (nt)  1209   Chromosome Location  IV: 10695435-10695581
Chromosome . Primary Identifier  IV Chromosome Location . Start  10695435
Chromosome Location . End  10695581
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R102.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35602 ALLO-1, isoform b 45.1 402 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00051660
WBRNAi00017677
WBRNAi00109801
WBRNAi00034800
WBRNAi00061639
WBRNAi00061865
WBRNAi00109660
WBRNAi00109754
WBRNAi00109707
WBRNAi00113648

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R102.5b 10695435 10695581 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011292 allo-1 R102.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:R102.5b 10695435 10695581 -1
CDS:R102.5b 10695737 10696419 -1
CDS:R102.5b 10696476 10696793 -1
CDS:R102.5b 10697008 10697068 -1

1 Sequence

Length
1209

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R102.5b.1 R102.5b.1 1342   IV: 10695306-10697072