WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G8.2.1 Sequence Name  C06G8.2.1
Length (nt)  2526   Chromosome Location  IV: 10790653-10794559
Chromosome . Primary Identifier  IV Chromosome Location . Start  10790653
Chromosome Location . End  10794559 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003876 pept-2 C06G8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G8.2 C06G8.2 2358   IV: 10790680-10790742

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06G8.2.1 10790653 10794559 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142413   90   IV: 10790653-10790742 Caenorhabditis elegans
Exon142414   94   IV: 10790787-10790880 Caenorhabditis elegans
Exon142415   142   IV: 10790940-10791081 Caenorhabditis elegans
Exon142416   90   IV: 10791359-10791448 Caenorhabditis elegans
Exon142417   191   IV: 10791495-10791685 Caenorhabditis elegans
Exon142418   78   IV: 10791769-10791846 Caenorhabditis elegans
Exon142419   83   IV: 10791898-10791980 Caenorhabditis elegans
Exon142420   386   IV: 10792038-10792423 Caenorhabditis elegans
Exon142421   82   IV: 10792747-10792828 Caenorhabditis elegans
Exon142422   123   IV: 10792877-10792999 Caenorhabditis elegans
Exon142423   83   IV: 10793044-10793126 Caenorhabditis elegans
Exon142424   147   IV: 10793212-10793358 Caenorhabditis elegans
Exon142425   156   IV: 10793410-10793565 Caenorhabditis elegans
Exon142426   148   IV: 10793614-10793761 Caenorhabditis elegans
Exon142427   93   IV: 10793809-10793901 Caenorhabditis elegans
Exon142428   243   IV: 10793956-10794198 Caenorhabditis elegans
Exon142429   297   IV: 10794263-10794559 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06G8.2.1 10790653 10794559 1

1 Sequence

Length
2526

1 Sequence Ontology Term

Identifier Name Description
transcript