WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G8.3b.1 Sequence Name  C06G8.3b.1
Length (nt)  1358   Chromosome Location  IV: 10799676-10802250
Chromosome . Primary Identifier  IV Chromosome Location . Start  10799676
Chromosome Location . End  10802250 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014669 zipt-2.1 C06G8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G8.3b C06G8.3b 1092   IV: 10799684-10799773

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06G8.3b.1 10799676 10802250 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142433   98   IV: 10799676-10799773 Caenorhabditis elegans
Exon142435   125   IV: 10799830-10799954 Caenorhabditis elegans
Exon142438   118   IV: 10799999-10800116 Caenorhabditis elegans
Exon142441   83   IV: 10800160-10800242 Caenorhabditis elegans
Exon142444   78   IV: 10800376-10800453 Caenorhabditis elegans
Exon142445   232   IV: 10801019-10801250 Caenorhabditis elegans
Exon142448   624   IV: 10801627-10802250 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06G8.3b.1 10799676 10802250 1

1 Sequence

Length
1358

1 Sequence Ontology Term

Identifier Name Description
transcript