WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13H10.3a.1 Sequence Name  F13H10.3a.1
Length (nt)  2340   Chromosome Location  IV: 11012091-11015953
Chromosome . Primary Identifier  IV Chromosome Location . Start  11012091
Chromosome Location . End  11015953 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13H10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008774 F13H10.3 F13H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13H10.3a F13H10.3a 1848   IV: 11012513-11012678

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13H10.3a.1 11012091 11015953 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon142966   588   IV: 11012091-11012678 Caenorhabditis elegans
Exon142970   239   IV: 11012724-11012962 Caenorhabditis elegans
Exon142974   212   IV: 11013486-11013697 Caenorhabditis elegans
Exon142978   99   IV: 11013749-11013847 Caenorhabditis elegans
Exon142982   228   IV: 11013908-11014135 Caenorhabditis elegans
Exon142986   240   IV: 11014225-11014464 Caenorhabditis elegans
Exon142990   158   IV: 11014519-11014676 Caenorhabditis elegans
Exon142994   98   IV: 11014725-11014822 Caenorhabditis elegans
Exon142998   274   IV: 11014871-11015144 Caenorhabditis elegans
Exon143003   101   IV: 11015654-11015754 Caenorhabditis elegans
Exon143007   103   IV: 11015851-11015953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13H10.3a.1 11012091 11015953 -1

1 Sequence

Length
2340

1 Sequence Ontology Term

Identifier Name Description
transcript