WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.4h.1 Sequence Name  F36H1.4h.1
Length (nt)  1996   Chromosome Location  IV: 11054308-11063747
Chromosome . Primary Identifier  IV Chromosome Location . Start  11054308
Chromosome Location . End  11063747 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4h F36H1.4h 1266   IV: 11057814-11057868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4h.1 11054308 11063747 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143305   61   IV: 11054308-11054368 Caenorhabditis elegans
Exon143314   68   IV: 11057670-11057737 Caenorhabditis elegans
Exon143323   80   IV: 11057789-11057868 Caenorhabditis elegans
Exon143336   240   IV: 11059405-11059644 Caenorhabditis elegans
Exon143347   165   IV: 11059693-11059857 Caenorhabditis elegans
Exon143358   82   IV: 11060409-11060490 Caenorhabditis elegans
Exon143363   82   IV: 11060538-11060619 Caenorhabditis elegans
Exon143383   89   IV: 11061068-11061156 Caenorhabditis elegans
Exon143394   276   IV: 11061624-11061899 Caenorhabditis elegans
Exon143405   112   IV: 11061947-11062058 Caenorhabditis elegans
Exon143416   87   IV: 11062114-11062200 Caenorhabditis elegans
Exon143427   654   IV: 11063094-11063747 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4h.1 11054308 11063747 1

1 Sequence

Length
1996

1 Sequence Ontology Term

Identifier Name Description
transcript