WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H1.4h.2 Sequence Name  F36H1.4h.2
Length (nt)  1805   Chromosome Location  IV: 11057664-11063611
Chromosome . Primary Identifier  IV Chromosome Location . Start  11057664
Chromosome Location . End  11063611 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H1.4h.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H1.4h F36H1.4h 1266   IV: 11057814-11057868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4h.2 11057664 11063611 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143308   74   IV: 11057664-11057737 Caenorhabditis elegans
Exon143324   80   IV: 11057789-11057868 Caenorhabditis elegans
Exon143337   240   IV: 11059405-11059644 Caenorhabditis elegans
Exon143348   165   IV: 11059693-11059857 Caenorhabditis elegans
Exon143359   82   IV: 11060409-11060490 Caenorhabditis elegans
Exon143364   82   IV: 11060538-11060619 Caenorhabditis elegans
Exon143384   89   IV: 11061068-11061156 Caenorhabditis elegans
Exon143395   276   IV: 11061624-11061899 Caenorhabditis elegans
Exon143406   112   IV: 11061947-11062058 Caenorhabditis elegans
Exon143417   87   IV: 11062114-11062200 Caenorhabditis elegans
Exon143423   518   IV: 11063094-11063611 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H1.4h.2 11057664 11063611 1

1 Sequence

Length
1805

1 Sequence Ontology Term

Identifier Name Description
transcript