WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01G4.1.1 Sequence Name  F01G4.1.1
Length (nt)  4813   Chromosome Location  IV: 11126024-11131162
Chromosome . Primary Identifier  IV Chromosome Location . Start  11126024
Chromosome Location . End  11131162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004204 swsn-4 F01G4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01G4.1 F01G4.1 4425   IV: 11126074-11126529

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01G4.1.1 11126024 11131162 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143576   506   IV: 11126024-11126529 Caenorhabditis elegans
Exon143577   225   IV: 11126577-11126801 Caenorhabditis elegans
Exon143578   227   IV: 11126849-11127075 Caenorhabditis elegans
Exon143579   793   IV: 11127123-11127915 Caenorhabditis elegans
Exon143580   1650   IV: 11127964-11129613 Caenorhabditis elegans
Exon143581   507   IV: 11129658-11130164 Caenorhabditis elegans
Exon143582   486   IV: 11130210-11130695 Caenorhabditis elegans
Exon143583   419   IV: 11130744-11131162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01G4.1.1 11126024 11131162 1

1 Sequence

Length
4813

1 Sequence Ontology Term

Identifier Name Description
transcript