WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C05C12.3 Sequence Name  C05C12.3
Length (nt)  5085   Chromosome Location  IV: 11249004-11249042
Chromosome . Primary Identifier  IV Chromosome Location . Start  11249004
Chromosome Location . End  11249042
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05C12.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33754 GTL-1 193.0 1694 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00039701
WBRNAi00010181
WBRNAi00001394
WBRNAi00001519

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C05C12.3 11249004 11249042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001795 gtl-1 C05C12.3 Caenorhabditis elegans

32 Locations


Feature . Primary Identifier
Start End Strand
CDS:C05C12.3 11249004 11249042 -1
CDS:C05C12.3 11249092 11249157 -1
CDS:C05C12.3 11249201 11249279 -1
CDS:C05C12.3 11249349 11249505 -1
CDS:C05C12.3 11249863 11250019 -1
CDS:C05C12.3 11250065 11250220 -1
CDS:C05C12.3 11250268 11250509 -1
CDS:C05C12.3 11250624 11250923 -1
CDS:C05C12.3 11250974 11251217 -1
CDS:C05C12.3 11251265 11251379 -1
CDS:C05C12.3 11251641 11251856 -1
CDS:C05C12.3 11251905 11252038 -1
CDS:C05C12.3 11252086 11252240 -1
CDS:C05C12.3 11252497 11252710 -1
CDS:C05C12.3 11252756 11253068 -1
CDS:C05C12.3 11253122 11253283 -1
CDS:C05C12.3 11253348 11253445 -1
CDS:C05C12.3 11253490 11253638 -1
CDS:C05C12.3 11253685 11253859 -1
CDS:C05C12.3 11255812 11256294 -1
CDS:C05C12.3 11256338 11256461 -1
CDS:C05C12.3 11256509 11256598 -1
CDS:C05C12.3 11256692 11256835 -1
CDS:C05C12.3 11256878 11257076 -1
CDS:C05C12.3 11257467 11257594 -1
CDS:C05C12.3 11258008 11258146 -1
CDS:C05C12.3 11258245 11258329 -1
CDS:C05C12.3 11258374 11258595 -1
CDS:C05C12.3 11258659 11258712 -1
CDS:C05C12.3 11258761 11258852 -1

1 Sequence

Length
5085

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C05C12.3.1 C05C12.3.1 5275   IV: 11248884-11259535