WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D1.3.1 Sequence Name  F54D1.3.1
Length (nt)  1237   Chromosome Location  IV: 11264908-11266190
Chromosome . Primary Identifier  IV Chromosome Location . Start  11264908
Chromosome Location . End  11266190 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000701 col-127 F54D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D1.3 F54D1.3 885   IV: 11264947-11265720

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54D1.3.1 11264908 11266190 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143928   813   IV: 11264908-11265720 Caenorhabditis elegans
Exon143929   424   IV: 11265767-11266190 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54D1.3.1 11264908 11266190 -1

1 Sequence

Length
1237

1 Sequence Ontology Term

Identifier Name Description
transcript