WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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Nc Primary Transcript :

WormMine ID  Transcript:F54D1.4b Sequence Name  F54D1.4b
Length (nt)  1918   Chromosome Location  IV: 11266295-11271352
Chromosome . Primary Identifier  IV Chromosome Location . Start  11266295
Chromosome Location . End  11271352 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D1.4b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003606 nhr-7 F54D1.4 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54D1.4b 11266295 11271352 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon143932   573   IV: 11266295-11266867 Caenorhabditis elegans
Exon143935   161   IV: 11267114-11267274 Caenorhabditis elegans
Exon143938   113   IV: 11267321-11267433 Caenorhabditis elegans
Exon143941   119   IV: 11267481-11267599 Caenorhabditis elegans
Exon143944   410   IV: 11267700-11268109 Caenorhabditis elegans
Exon143947   66   IV: 11268165-11268230 Caenorhabditis elegans
Exon143950   115   IV: 11268281-11268395 Caenorhabditis elegans
Exon143953   132   IV: 11268724-11268855 Caenorhabditis elegans
Exon143954   229   IV: 11271124-11271352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54D1.4b 11266295 11271352 -1

1 Sequence

Length
1918

1 Sequence Ontology Term

Identifier Name Description
transcript