WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10C6.1a.3 Sequence Name  C10C6.1a.3
Length (nt)  5232   Chromosome Location  IV: 11436535-11447067
Chromosome . Primary Identifier  IV Chromosome Location . Start  11436535
Chromosome Location . End  11447067 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10C6.1a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002192 kin-4 C10C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10C6.1a C10C6.1a 4698   IV: 11436647-11436770

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C10C6.1a.3 11436535 11447067 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon144367   236   IV: 11436535-11436770 Caenorhabditis elegans
Exon144379   394   IV: 11437512-11437905 Caenorhabditis elegans
Exon144391   130   IV: 11439156-11439285 Caenorhabditis elegans
Exon144400   179   IV: 11439494-11439672 Caenorhabditis elegans
Exon144411   277   IV: 11439723-11439999 Caenorhabditis elegans
Exon144422   186   IV: 11441214-11441399 Caenorhabditis elegans
Exon144433   214   IV: 11441857-11442070 Caenorhabditis elegans
Exon144444   167   IV: 11442118-11442284 Caenorhabditis elegans
Exon144455   371   IV: 11442331-11442701 Caenorhabditis elegans
Exon144466   153   IV: 11442754-11442906 Caenorhabditis elegans
Exon144477   139   IV: 11442959-11443097 Caenorhabditis elegans
Exon144488   238   IV: 11443143-11443380 Caenorhabditis elegans
Exon144499   152   IV: 11443431-11443582 Caenorhabditis elegans
Exon144510   153   IV: 11443628-11443780 Caenorhabditis elegans
Exon144521   447   IV: 11443827-11444273 Caenorhabditis elegans
Exon144532   786   IV: 11444785-11445570 Caenorhabditis elegans
Exon144543   269   IV: 11445640-11445908 Caenorhabditis elegans
Exon144561   741   IV: 11446327-11447067 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C10C6.1a.3 11436535 11447067 1

1 Sequence

Length
5232

1 Sequence Ontology Term

Identifier Name Description
transcript