WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F12F6.5a Sequence Name  F12F6.5a
Length (nt)  3180   Chromosome Location  IV: 11570543-11570711
Chromosome . Primary Identifier  IV Chromosome Location . Start  11570543
Chromosome Location . End  11570711
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12F6.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20680 SRGP-1, isoform a 120.2 1059 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00086047
WBRNAi00086048
WBRNAi00044452
WBRNAi00007762
WBRNAi00013170
WBRNAi00077911
WBRNAi00030859

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F12F6.5a 11570543 11570711 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006406 srgp-1 F12F6.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F12F6.5a 11570543 11570711 1
CDS:F12F6.5a 11574615 11575756 1
CDS:F12F6.5a 11576021 11576931 1
CDS:F12F6.5a 11577000 11577728 1
CDS:F12F6.5a 11578080 11578193 1
CDS:F12F6.5a 11578244 11578358 1

1 Sequence

Length
3180

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F12F6.5a.1 F12F6.5a.1 3564   IV: 11570500-11578699