WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F11A10.1a Sequence Name  F11A10.1a
Length (nt)  3876   Chromosome Location  IV: 12079475-12079600
Chromosome . Primary Identifier  IV Chromosome Location . Start  12079475
Chromosome Location . End  12079600
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A10.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40608 LEX-1, isoform a 146.4 1291 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00044335
WBRNAi00007530
WBRNAi00013097
WBRNAi00077900
WBRNAi00030800
WBRNAi00073017
WBRNAi00117711
WBRNAi00105134
WBRNAi00105133
WBRNAi00105136
WBRNAi00105135
WBRNAi00105138
WBRNAi00105137
WBRNAi00105140
WBRNAi00105139
WBRNAi00105142
WBRNAi00105141
WBRNAi00105144
WBRNAi00105143
WBRNAi00105146
WBRNAi00105145
WBRNAi00105148
WBRNAi00105147
WBRNAi00105150
WBRNAi00105149
WBRNAi00105152
WBRNAi00105151
WBRNAi00105154
WBRNAi00105153
WBRNAi00105156

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F11A10.1a 12079475 12079600 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008682 lex-1 F11A10.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F11A10.1a 12079475 12079600 1
CDS:F11A10.1a 12079647 12079780 1
CDS:F11A10.1a 12079828 12080045 1
CDS:F11A10.1a 12080088 12082158 1
CDS:F11A10.1a 12082215 12082300 1
CDS:F11A10.1a 12082359 12082505 1
CDS:F11A10.1a 12082552 12083506 1
CDS:F11A10.1a 12083878 12084016 1

1 Sequence

Length
3876

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11A10.1a.1 F11A10.1a.1 4224   IV: 12079473-12084362