WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A10.4a.1 Sequence Name  F11A10.4a.1
Length (nt)  5285   Chromosome Location  IV: 12096779-12105762
Chromosome . Primary Identifier  IV Chromosome Location . Start  12096779
Chromosome Location . End  12105762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008685 mon-2 F11A10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A10.4a F11A10.4a 4941   IV: 12096781-12097086

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11A10.4a.1 12096779 12105762 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146412   308   IV: 12096779-12097086 Caenorhabditis elegans
Exon146413   132   IV: 12097457-12097588 Caenorhabditis elegans
Exon146415   357   IV: 12097639-12097995 Caenorhabditis elegans
Exon146417   234   IV: 12098053-12098286 Caenorhabditis elegans
Exon146419   241   IV: 12098340-12098580 Caenorhabditis elegans
Exon146421   109   IV: 12099164-12099272 Caenorhabditis elegans
Exon146423   1009   IV: 12099320-12100328 Caenorhabditis elegans
Exon146425   284   IV: 12100690-12100973 Caenorhabditis elegans
Exon146427   169   IV: 12101021-12101189 Caenorhabditis elegans
Exon146429   1152   IV: 12101686-12102837 Caenorhabditis elegans
Exon146431   314   IV: 12103331-12103644 Caenorhabditis elegans
Exon146433   185   IV: 12104595-12104779 Caenorhabditis elegans
Exon146436   152   IV: 12104923-12105074 Caenorhabditis elegans
Exon146437   639   IV: 12105124-12105762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11A10.4a.1 12096779 12105762 1

1 Sequence

Length
5285

1 Sequence Ontology Term

Identifier Name Description
transcript