WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35G2.4.1 Sequence Name  F35G2.4.1
Length (nt)  1736   Chromosome Location  IV: 12211097-12215987
Chromosome . Primary Identifier  IV Chromosome Location . Start  12211097
Chromosome Location . End  12215987 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35G2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004025 phy-2 F35G2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35G2.4 F35G2.4 1620   IV: 12211212-12211394

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35G2.4.1 12211097 12215987 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146749   298   IV: 12211097-12211394 Caenorhabditis elegans
Exon146750   99   IV: 12211441-12211539 Caenorhabditis elegans
Exon146751   66   IV: 12212237-12212302 Caenorhabditis elegans
Exon146752   54   IV: 12212540-12212593 Caenorhabditis elegans
Exon146753   100   IV: 12213155-12213254 Caenorhabditis elegans
Exon146754   71   IV: 12213360-12213430 Caenorhabditis elegans
Exon146756   243   IV: 12213967-12214209 Caenorhabditis elegans
Exon146757   222   IV: 12214252-12214473 Caenorhabditis elegans
Exon146758   418   IV: 12214772-12215189 Caenorhabditis elegans
Exon146759   86   IV: 12215778-12215863 Caenorhabditis elegans
Exon146760   79   IV: 12215909-12215987 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35G2.4.1 12211097 12215987 -1

1 Sequence

Length
1736

1 Sequence Ontology Term

Identifier Name Description
transcript