WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42C1.13a.1 Sequence Name  C42C1.13a.1
Length (nt)  504   Chromosome Location  IV: 12278953-12279499
Chromosome . Primary Identifier  IV Chromosome Location . Start  12278953
Chromosome Location . End  12279499 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016591 vkmt-1 C42C1.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42C1.13a C42C1.13a 504   IV: 12278953-12279003

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C42C1.13a.1 12278953 12279499 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146912   51   IV: 12278953-12279003 Caenorhabditis elegans
Exon146913   453   IV: 12279047-12279499 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C42C1.13a.1 12278953 12279499 1

1 Sequence

Length
504

1 Sequence Ontology Term

Identifier Name Description
transcript