WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42C1.10.1 Sequence Name  C42C1.10.1
Length (nt)  1192   Chromosome Location  IV: 12283173-12285122
Chromosome . Primary Identifier  IV Chromosome Location . Start  12283173
Chromosome Location . End  12285122 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016588 hpo-12 C42C1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42C1.10 C42C1.10 942   IV: 12283199-12283375

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C42C1.10.1 12283173 12285122 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146936   203   IV: 12283173-12283375 Caenorhabditis elegans
Exon146938   231   IV: 12283426-12283656 Caenorhabditis elegans
Exon146940   276   IV: 12283816-12284091 Caenorhabditis elegans
Exon146943   482   IV: 12284641-12285122 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C42C1.10.1 12283173 12285122 1

1 Sequence

Length
1192

1 Sequence Ontology Term

Identifier Name Description
transcript