WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19B6.1a.3 Sequence Name  F19B6.1a.3
Length (nt)  2172   Chromosome Location  IV: 12330976-12334103
Chromosome . Primary Identifier  IV Chromosome Location . Start  12330976
Chromosome Location . End  12334103 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19B6.1a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008948 F19B6.1 F19B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19B6.1a F19B6.1a 1548   IV: 12331581-12331715

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19B6.1a.3 12330976 12334103 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147039   740   IV: 12330976-12331715 Caenorhabditis elegans
Exon147048   349   IV: 12331758-12332106 Caenorhabditis elegans
Exon147053   383   IV: 12332657-12333039 Caenorhabditis elegans
Exon147058   198   IV: 12333089-12333286 Caenorhabditis elegans
Exon147063   354   IV: 12333552-12333905 Caenorhabditis elegans
Exon147070   148   IV: 12333956-12334103 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19B6.1a.3 12330976 12334103 -1

1 Sequence

Length
2172

1 Sequence Ontology Term

Identifier Name Description
transcript