WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04A11.2.1 Sequence Name  T04A11.2.1
Length (nt)  951   Chromosome Location  IV: 12477373-12479000
Chromosome . Primary Identifier  IV Chromosome Location . Start  12477373
Chromosome Location . End  12479000 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04A11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011417 T04A11.2 T04A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A11.2 T04A11.2 951   IV: 12477373-12477480

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04A11.2.1 12477373 12479000 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147504   108   IV: 12477373-12477480 Caenorhabditis elegans
Exon147505   345   IV: 12477527-12477871 Caenorhabditis elegans
Exon147506   54   IV: 12478334-12478387 Caenorhabditis elegans
Exon147507   354   IV: 12478441-12478794 Caenorhabditis elegans
Exon147508   90   IV: 12478911-12479000 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04A11.2.1 12477373 12479000 -1

1 Sequence

Length
951

1 Sequence Ontology Term

Identifier Name Description
transcript