WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK896.8.1 Sequence Name  ZK896.8.1
Length (nt)  3727   Chromosome Location  IV: 12860097-12865956
Chromosome . Primary Identifier  IV Chromosome Location . Start  12860097
Chromosome Location . End  12865956 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK896.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001543 gcy-18 ZK896.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK896.8 ZK896.8 3342   IV: 12860137-12860408

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.8.1 12860097 12865956 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148775   312   IV: 12860097-12860408 Caenorhabditis elegans
Exon148776   110   IV: 12860489-12860598 Caenorhabditis elegans
Exon148777   81   IV: 12860650-12860730 Caenorhabditis elegans
Exon148778   101   IV: 12861469-12861569 Caenorhabditis elegans
Exon148779   175   IV: 12861854-12862028 Caenorhabditis elegans
Exon148780   293   IV: 12862075-12862367 Caenorhabditis elegans
Exon148781   148   IV: 12862408-12862555 Caenorhabditis elegans
Exon148782   209   IV: 12862814-12863022 Caenorhabditis elegans
Exon148783   89   IV: 12863069-12863157 Caenorhabditis elegans
Exon148784   90   IV: 12863208-12863297 Caenorhabditis elegans
Exon148785   421   IV: 12863539-12863959 Caenorhabditis elegans
Exon148786   202   IV: 12864113-12864314 Caenorhabditis elegans
Exon148787   186   IV: 12864361-12864546 Caenorhabditis elegans
Exon148788   172   IV: 12864598-12864769 Caenorhabditis elegans
Exon148789   1138   IV: 12864819-12865956 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK896.8.1 12860097 12865956 1

1 Sequence

Length
3727

1 Sequence Ontology Term

Identifier Name Description
transcript