WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y62E10A.5a Sequence Name  Y62E10A.5a
Length (nt)  528   Chromosome Location  IV: 13368524-13368721
Chromosome . Primary Identifier  IV Chromosome Location . Start  13368524
Chromosome Location . End  13368721
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y62E10A.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38250 AGT-1, isoform a 19.1 175 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00057853
WBRNAi00021217
WBRNAi00037675
WBRNAi00061945
WBRNAi00070719
WBRNAi00070720

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y62E10A.5a 13368524 13368721 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000093 agt-1 Y62E10A.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y62E10A.5a 13368524 13368721 -1
CDS:Y62E10A.5a 13368990 13369124 -1
CDS:Y62E10A.5a 13369175 13369318 -1
CDS:Y62E10A.5a 13369362 13369412 -1

1 Sequence

Length
528

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y62E10A.5a.1 Y62E10A.5a.1 776   IV: 13368276-13369412