WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09B11.10.1 Sequence Name  K09B11.10.1
Length (nt)  2457   Chromosome Location  IV: 13434172-13445375
Chromosome . Primary Identifier  IV Chromosome Location . Start  13434172
Chromosome Location . End  13445375 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09B11.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010714 mam-3 K09B11.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09B11.10 K09B11.10 2220   IV: 13434300-13434440

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09B11.10.1 13434172 13445375 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150351   269   IV: 13434172-13434440 Caenorhabditis elegans
Exon150352   275   IV: 13435180-13435454 Caenorhabditis elegans
Exon150353   236   IV: 13435519-13435754 Caenorhabditis elegans
Exon150357   281   IV: 13439702-13439982 Caenorhabditis elegans
Exon150358   271   IV: 13440043-13440313 Caenorhabditis elegans
Exon150359   134   IV: 13440369-13440502 Caenorhabditis elegans
Exon150363   182   IV: 13442077-13442258 Caenorhabditis elegans
Exon150364   263   IV: 13442498-13442760 Caenorhabditis elegans
Exon150365   167   IV: 13443149-13443315 Caenorhabditis elegans
Exon150369   128   IV: 13444278-13444405 Caenorhabditis elegans
Exon150370   251   IV: 13445125-13445375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09B11.10.1 13434172 13445375 -1

1 Sequence

Length
2457

1 Sequence Ontology Term

Identifier Name Description
transcript