WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38H8A.3.1 Sequence Name  Y38H8A.3.1
Length (nt)  1272   Chromosome Location  IV: 13472311-13474019
Chromosome . Primary Identifier  IV Chromosome Location . Start  13472311
Chromosome Location . End  13474019 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H8A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012637 ttbk-8.1 Y38H8A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38H8A.3 Y38H8A.3 927   IV: 13472572-13472610

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38H8A.3.1 13472311 13474019 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150412   300   IV: 13472311-13472610 Caenorhabditis elegans
Exon150413   120   IV: 13472661-13472780 Caenorhabditis elegans
Exon150414   446   IV: 13473071-13473516 Caenorhabditis elegans
Exon150415   406   IV: 13473614-13474019 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38H8A.3.1 13472311 13474019 1

1 Sequence

Length
1272

1 Sequence Ontology Term

Identifier Name Description
transcript