WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38H8A.2a Sequence Name  Y38H8A.2a
Length (nt)  768   Chromosome Location  IV: 13474432-13474490
Chromosome . Primary Identifier  IV Chromosome Location . Start  13474432
Chromosome Location . End  13474490
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H8A.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18364 Y38H8A.2, isoform a 28.8 255 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00094787
WBRNAi00056085
WBRNAi00076774
WBRNAi00036876

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38H8A.2a 13474432 13474490 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012636 Y38H8A.2 Y38H8A.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38H8A.2a 13474432 13474490 1
CDS:Y38H8A.2a 13474534 13474660 1
CDS:Y38H8A.2a 13474712 13474805 1
CDS:Y38H8A.2a 13475074 13475274 1
CDS:Y38H8A.2a 13475931 13476217 1

1 Sequence

Length
768

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38H8A.2a.1 Y38H8A.2a.1 804   IV: 13474432-13476253