WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10A.6b.1 Sequence Name  Y45F10A.6b.1
Length (nt)  3918   Chromosome Location  IV: 13476937-13502850
Chromosome . Primary Identifier  IV Chromosome Location . Start  13476937
Chromosome Location . End  13502850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10A.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012868 tbc-9 Y45F10A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10A.6b Y45F10A.6b 3738   IV: 13477112-13477151

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.6b.1 13476937 13502850 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150425   215   IV: 13476937-13477151 Caenorhabditis elegans
Exon150429   117   IV: 13477993-13478109 Caenorhabditis elegans
Exon150437   406   IV: 13478158-13478563 Caenorhabditis elegans
Exon150444   163   IV: 13479650-13479812 Caenorhabditis elegans
Exon150451   415   IV: 13480421-13480835 Caenorhabditis elegans
Exon150458   110   IV: 13481947-13482056 Caenorhabditis elegans
Exon150469   207   IV: 13485527-13485733 Caenorhabditis elegans
Exon150476   246   IV: 13486747-13486992 Caenorhabditis elegans
Exon150485   753   IV: 13487915-13488667 Caenorhabditis elegans
Exon150492   246   IV: 13489486-13489731 Caenorhabditis elegans
Exon150499   133   IV: 13489795-13489927 Caenorhabditis elegans
Exon150533   144   IV: 13497766-13497909 Caenorhabditis elegans
Exon150540   146   IV: 13497960-13498105 Caenorhabditis elegans
Exon150550   134   IV: 13499040-13499173 Caenorhabditis elegans
Exon150554   87   IV: 13499228-13499314 Caenorhabditis elegans
Exon150559   96   IV: 13500819-13500914 Caenorhabditis elegans
Exon150563   248   IV: 13500974-13501221 Caenorhabditis elegans
Exon150566   52   IV: 13502799-13502850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.6b.1 13476937 13502850 -1

1 Sequence

Length
3918

1 Sequence Ontology Term

Identifier Name Description
transcript