WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10B.10c.1 Sequence Name  Y45F10B.10c.1
Length (nt)  3984   Chromosome Location  IV: 13566352-13574341
Chromosome . Primary Identifier  IV Chromosome Location . Start  13566352
Chromosome Location . End  13574341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10B.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004265 qui-1 Y45F10B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10B.10c Y45F10B.10c 3984   IV: 13566352-13566459

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.10c.1 13566352 13574341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150742   108   IV: 13566352-13566459 Caenorhabditis elegans
Exon150744   109   IV: 13566528-13566636 Caenorhabditis elegans
Exon150746   190   IV: 13566997-13567186 Caenorhabditis elegans
Exon150748   247   IV: 13567235-13567481 Caenorhabditis elegans
Exon150751   675   IV: 13568561-13569235 Caenorhabditis elegans
Exon150754   223   IV: 13569562-13569784 Caenorhabditis elegans
Exon150756   479   IV: 13569840-13570318 Caenorhabditis elegans
Exon150758   314   IV: 13570405-13570718 Caenorhabditis elegans
Exon150760   244   IV: 13571180-13571423 Caenorhabditis elegans
Exon150762   354   IV: 13571476-13571829 Caenorhabditis elegans
Exon150764   203   IV: 13572135-13572337 Caenorhabditis elegans
Exon150766   368   IV: 13572612-13572979 Caenorhabditis elegans
Exon150768   398   IV: 13573332-13573729 Caenorhabditis elegans
Exon150769   72   IV: 13574270-13574341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10B.10c.1 13566352 13574341 1

1 Sequence

Length
3984

1 Sequence Ontology Term

Identifier Name Description
transcript