WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.11c.1 Sequence Name  Y37A1B.11c.1
Length (nt)  2055   Chromosome Location  IV: 13999061-14012026
Chromosome . Primary Identifier  IV Chromosome Location . Start  13999061
Chromosome Location . End  14012026 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.11c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001190 egl-23 Y37A1B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.11c Y37A1B.11c 2055   IV: 13999061-13999096

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.11c.1 13999061 14012026 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152619   36   IV: 13999061-13999096 Caenorhabditis elegans
Exon152637   154   IV: 14003858-14004011 Caenorhabditis elegans
Exon152642   94   IV: 14004505-14004598 Caenorhabditis elegans
Exon152651   70   IV: 14005096-14005165 Caenorhabditis elegans
Exon152659   229   IV: 14006057-14006285 Caenorhabditis elegans
Exon152666   160   IV: 14007044-14007203 Caenorhabditis elegans
Exon152675   306   IV: 14007567-14007872 Caenorhabditis elegans
Exon152692   159   IV: 14009890-14010048 Caenorhabditis elegans
Exon152699   194   IV: 14010222-14010415 Caenorhabditis elegans
Exon152704   171   IV: 14010790-14010960 Caenorhabditis elegans
Exon152710   144   IV: 14011366-14011509 Caenorhabditis elegans
Exon152712   338   IV: 14011689-14012026 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.11c.1 13999061 14012026 1

1 Sequence

Length
2055

1 Sequence Ontology Term

Identifier Name Description
transcript