WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37A1B.2f.1 Sequence Name  Y37A1B.2f.1
Length (nt)  1878   Chromosome Location  IV: 14061012-14064662
Chromosome . Primary Identifier  IV Chromosome Location . Start  14061012
Chromosome Location . End  14064662 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37A1B.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003086 lst-4 Y37A1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37A1B.2f Y37A1B.2f 1518   IV: 14061369-14061602

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.2f.1 14061012 14064662 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152955   591   IV: 14061012-14061602 Caenorhabditis elegans
Exon152962   167   IV: 14062162-14062328 Caenorhabditis elegans
Exon152968   78   IV: 14062388-14062465 Caenorhabditis elegans
Exon152974   104   IV: 14062521-14062624 Caenorhabditis elegans
Exon152981   341   IV: 14062690-14063030 Caenorhabditis elegans
Exon152988   357   IV: 14063071-14063427 Caenorhabditis elegans
Exon152989   200   IV: 14064202-14064401 Caenorhabditis elegans
Exon152990   40   IV: 14064623-14064662 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37A1B.2f.1 14061012 14064662 -1

1 Sequence

Length
1878

1 Sequence Ontology Term

Identifier Name Description
transcript