WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H12I19.5.1 Sequence Name  H12I19.5.1
Length (nt)  1999   Chromosome Location  IV: 14150331-14153361
Chromosome . Primary Identifier  IV Chromosome Location . Start  14150331
Chromosome Location . End  14153361 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H12I19.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010392 oac-38 H12I19.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H12I19.5 H12I19.5 1767   IV: 14150529-14150534

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H12I19.5.1 14150331 14153361 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon153443   204   IV: 14150331-14150534 Caenorhabditis elegans
Exon153445   211   IV: 14150589-14150799 Caenorhabditis elegans
Exon153446   115   IV: 14150844-14150958 Caenorhabditis elegans
Exon153448   130   IV: 14151081-14151210 Caenorhabditis elegans
Exon153449   113   IV: 14151256-14151368 Caenorhabditis elegans
Exon153450   164   IV: 14151416-14151579 Caenorhabditis elegans
Exon153451   240   IV: 14151627-14151866 Caenorhabditis elegans
Exon153452   169   IV: 14151924-14152092 Caenorhabditis elegans
Exon153453   232   IV: 14152136-14152367 Caenorhabditis elegans
Exon153454   277   IV: 14152898-14153174 Caenorhabditis elegans
Exon153455   144   IV: 14153218-14153361 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H12I19.5.1 14150331 14153361 -1

1 Sequence

Length
1999

1 Sequence Ontology Term

Identifier Name Description
transcript