WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55B11.1 Sequence Name  F55B11.1
Length (nt)  4077   Chromosome Location  IV: 14401184-14401312
Chromosome . Primary Identifier  IV Chromosome Location . Start  14401184
Chromosome Location . End  14401312
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55B11.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16116 XDH-1 150.3 1358 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001806
WBRNAi00048444
WBRNAi00015689
WBRNAi00065281

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F55B11.1 14401184 14401312 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010083 xdh-1 F55B11.1 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F55B11.1 14401184 14401312 -1
CDS:F55B11.1 14401784 14402249 -1
CDS:F55B11.1 14403109 14403365 -1
CDS:F55B11.1 14404583 14404760 -1
CDS:F55B11.1 14405427 14405757 -1
CDS:F55B11.1 14406070 14406163 -1
CDS:F55B11.1 14406720 14407178 -1
CDS:F55B11.1 14408422 14408832 -1
CDS:F55B11.1 14409482 14410114 -1
CDS:F55B11.1 14410228 14410537 -1
CDS:F55B11.1 14411006 14411157 -1
CDS:F55B11.1 14411217 14411330 -1
CDS:F55B11.1 14411577 14411772 -1
CDS:F55B11.1 14411986 14412111 -1
CDS:F55B11.1 14412472 14412562 -1
CDS:F55B11.1 14412757 14412886 -1

1 Sequence

Length
4077

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55B11.1.1 F55B11.1.1 4155   IV: 14401114-14412894