WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y57G11C.24i.1 Sequence Name  Y57G11C.24i.1
Length (nt)  3056   Chromosome Location  IV: 14879491-14900545
Chromosome . Primary Identifier  IV Chromosome Location . Start  14879491
Chromosome Location . End  14900545 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24i Y57G11C.24i 2829   IV: 14879566-14879615

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24i.1 14879491 14900545 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157189   125   IV: 14879491-14879615 Caenorhabditis elegans
Exon157231   131   IV: 14885573-14885703 Caenorhabditis elegans
Exon157243   221   IV: 14886614-14886834 Caenorhabditis elegans
Exon157260   228   IV: 14888379-14888606 Caenorhabditis elegans
Exon157272   124   IV: 14889210-14889333 Caenorhabditis elegans
Exon157297   311   IV: 14891464-14891774 Caenorhabditis elegans
Exon157309   233   IV: 14891833-14892065 Caenorhabditis elegans
Exon157325   178   IV: 14893787-14893964 Caenorhabditis elegans
Exon157332   75   IV: 14894167-14894241 Caenorhabditis elegans
Exon157342   104   IV: 14894341-14894444 Caenorhabditis elegans
Exon157353   316   IV: 14894534-14894849 Caenorhabditis elegans
Exon157365   111   IV: 14894906-14895016 Caenorhabditis elegans
Exon157379   67   IV: 14896060-14896126 Caenorhabditis elegans
Exon157394   185   IV: 14897321-14897505 Caenorhabditis elegans
Exon157406   82   IV: 14897620-14897701 Caenorhabditis elegans
Exon157419   157   IV: 14898130-14898286 Caenorhabditis elegans
Exon157432   136   IV: 14898645-14898780 Caenorhabditis elegans
Exon157460   272   IV: 14900274-14900545 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24i.1 14879491 14900545 1

1 Sequence

Length
3056

1 Sequence Ontology Term

Identifier Name Description
transcript