WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y41E3.11b Sequence Name  Y41E3.11b
Length (nt)  2754   Chromosome Location  IV: 15043049-15043643
Chromosome . Primary Identifier  IV Chromosome Location . Start  15043049
Chromosome Location . End  15043643
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.11b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18379 HRPU-1, isoform b 101.8 917 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00095785
WBRNAi00009324
WBRNAi00056404
WBRNAi00026697
WBRNAi00099865
WBRNAi00083613
WBRNAi00083717
WBRNAi00083806
WBRNAi00099259
WBRNAi00099663
WBRNAi00099461
WBRNAi00073358
WBRNAi00037002
WBRNAi00073359
WBRNAi00023352
WBRNAi00023865
WBRNAi00024152
WBRNAi00024225
WBRNAi00083553
WBRNAi00111758

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y41E3.11b 15043049 15043643 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012769 hrpu-1 Y41E3.11 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y41E3.11b 15043049 15043643 1
CDS:Y41E3.11b 15044165 15044726 1
CDS:Y41E3.11b 15045292 15046414 1
CDS:Y41E3.11b 15047323 15047619 1
CDS:Y41E3.11b 15048760 15048936 1

1 Sequence

Length
2754

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y41E3.11b.1 Y41E3.11b.1 2754   IV: 15043049-15048936