WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73F8A.17.1 Sequence Name  Y73F8A.17.1
Length (nt)  1242   Chromosome Location  IV: 15326846-15328192
Chromosome . Primary Identifier  IV Chromosome Location . Start  15326846
Chromosome Location . End  15328192 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73F8A.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006559 tbx-40 Y73F8A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73F8A.17 Y73F8A.17 1143   IV: 15326939-15327697

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.17.1 15326846 15328192 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon159458   852   IV: 15326846-15327697 Caenorhabditis elegans
Exon159460   187   IV: 15327752-15327938 Caenorhabditis elegans
Exon159461   203   IV: 15327990-15328192 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.17.1 15326846 15328192 -1

1 Sequence

Length
1242

1 Sequence Ontology Term

Identifier Name Description
transcript