WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.28c.1 Sequence Name  Y105C5B.28c.1
Length (nt)  792   Chromosome Location  IV: 16167897-16169097
Chromosome . Primary Identifier  IV Chromosome Location . Start  16167897
Chromosome Location . End  16169097 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.28c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001604 gln-3 Y105C5B.28 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.28c Y105C5B.28c 792   IV: 16167897-16168245

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5B.28c.1 16167897 16169097 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon163511   349   IV: 16167897-16168245 Caenorhabditis elegans
Exon163512   443   IV: 16168655-16169097 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105C5B.28c.1 16167897 16169097 -1

1 Sequence

Length
792

1 Sequence Ontology Term

Identifier Name Description
transcript