WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116A8C.4 Sequence Name  Y116A8C.4
Length (nt)  2145   Chromosome Location  IV: 16920511-16920774
Chromosome . Primary Identifier  IV Chromosome Location . Start  16920511
Chromosome Location . End  16920774
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40629 NEP-23 81.8 714 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00007425
WBRNAi00055457
WBRNAi00019931
WBRNAi00108668
WBRNAi00108593
WBRNAi00089185

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y116A8C.4 16920511 16920774 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013785 nep-23 Y116A8C.4 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y116A8C.4 16920511 16920774 1
CDS:Y116A8C.4 16920846 16920975 1
CDS:Y116A8C.4 16921023 16921117 1
CDS:Y116A8C.4 16921172 16921286 1
CDS:Y116A8C.4 16921329 16921558 1
CDS:Y116A8C.4 16921605 16921787 1
CDS:Y116A8C.4 16921876 16922004 1
CDS:Y116A8C.4 16922772 16923026 1
CDS:Y116A8C.4 16923070 16923232 1
CDS:Y116A8C.4 16923277 16923524 1
CDS:Y116A8C.4 16923576 16923734 1
CDS:Y116A8C.4 16923898 16924071 1

1 Sequence

Length
2145

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116A8C.4.1 Y116A8C.4.1 2257   IV: 16920341-16924118