WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116A8C.14a Sequence Name  Y116A8C.14a
Length (nt)  2586   Chromosome Location  IV: 16965284-16965454
Chromosome . Primary Identifier  IV Chromosome Location . Start  16965284
Chromosome Location . End  16965454
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.14a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39642 ROM-3, isoform a 98.2 861 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055430
WBRNAi00019916
WBRNAi00062579

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.14a 16965284 16965454 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004402 rom-3 Y116A8C.14 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y116A8C.14a 16965284 16965454 -1
CDS:Y116A8C.14a 16965648 16965907 -1
CDS:Y116A8C.14a 16965971 16966116 -1
CDS:Y116A8C.14a 16966341 16967026 -1
CDS:Y116A8C.14a 16967079 16967696 -1
CDS:Y116A8C.14a 16967771 16967884 -1
CDS:Y116A8C.14a 16968013 16968160 -1
CDS:Y116A8C.14a 16968731 16968804 -1
CDS:Y116A8C.14a 16968857 16969008 -1
CDS:Y116A8C.14a 16970114 16970169 -1
CDS:Y116A8C.14a 16970212 16970283 -1
CDS:Y116A8C.14a 16970350 16970414 -1
CDS:Y116A8C.14a 16970467 16970490 -1

1 Sequence

Length
2586

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116A8C.14a.1 Y116A8C.14a.1 2586   IV: 16965284-16970490