WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.26b.1 Sequence Name  Y116A8C.26b.1
Length (nt)  572   Chromosome Location  IV: 17086732-17087397
Chromosome . Primary Identifier  IV Chromosome Location . Start  17086732
Chromosome Location . End  17087397 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.26b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013803 snx-13 Y116A8C.26 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.26b Y116A8C.26b 447   IV: 17086789-17086926

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.26b.1 17086732 17087397 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166926   195   IV: 17086732-17086926 Caenorhabditis elegans
Exon166929   202   IV: 17086975-17087176 Caenorhabditis elegans
Exon166930   175   IV: 17087223-17087397 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.26b.1 17086732 17087397 -1

1 Sequence

Length
572

1 Sequence Ontology Term

Identifier Name Description
transcript