WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F11E6.8a.1 Sequence Name  F11E6.8a.1
Length (nt)  1807   Chromosome Location  IV: 17444122-17450543
Chromosome . Primary Identifier  IV Chromosome Location . Start  17444122
Chromosome Location . End  17450543 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11E6.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008711 F11E6.8 F11E6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11E6.8a F11E6.8a 1329   IV: 17444537-17444653

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11E6.8a.1 17444122 17450543 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168538   532   IV: 17444122-17444653 Caenorhabditis elegans
Exon168540   91   IV: 17444746-17444836 Caenorhabditis elegans
Exon168544   137   IV: 17444897-17445033 Caenorhabditis elegans
Exon168546   80   IV: 17445076-17445155 Caenorhabditis elegans
Exon168548   202   IV: 17445208-17445409 Caenorhabditis elegans
Exon168550   188   IV: 17445457-17445644 Caenorhabditis elegans
Exon168552   81   IV: 17445790-17445870 Caenorhabditis elegans
Exon168555   120   IV: 17446491-17446610 Caenorhabditis elegans
Exon168558   145   IV: 17449563-17449707 Caenorhabditis elegans
Exon168560   102   IV: 17449897-17449998 Caenorhabditis elegans
Exon168562   129   IV: 17450415-17450543 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11E6.8a.1 17444122 17450543 -1

1 Sequence

Length
1807

1 Sequence Ontology Term

Identifier Name Description
transcript