WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0348.6c.1 Sequence Name  B0348.6c.1
Length (nt)  1115   Chromosome Location  V: 6584-7828
Chromosome . Primary Identifier  V Chromosome Location . Start  6584
Chromosome Location . End  7828 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0348.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002061 ife-3 B0348.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.6c B0348.6c 753   V: 6936-7110

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0348.6c.1 6584 7828 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168725   527   V: 6584-7110 Caenorhabditis elegans
Exon168729   233   V: 7158-7390 Caenorhabditis elegans
Exon168733   177   V: 7433-7609 Caenorhabditis elegans
Exon168736   178   V: 7651-7828 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0348.6c.1 6584 7828 -1

1 Sequence

Length
1115

1 Sequence Ontology Term

Identifier Name Description
transcript