WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DC2.2.1 Sequence Name  DC2.2.1
Length (nt)  1109   Chromosome Location  V: 217147-219513
Chromosome . Primary Identifier  V Chromosome Location . Start  217147
Chromosome Location . End  219513 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DC2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005299 srh-78 DC2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DC2.2 DC2.2 1062   V: 217154-217365

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DC2.2.1 217147 219513 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon169556   219   V: 217147-217365 Caenorhabditis elegans
Exon169557   146   V: 217419-217564 Caenorhabditis elegans
Exon169558   510   V: 218219-218728 Caenorhabditis elegans
Exon169559   234   V: 219280-219513 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DC2.2.1 217147 219513 1

1 Sequence

Length
1109

1 Sequence Ontology Term

Identifier Name Description
transcript