WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F33E11.1a Sequence Name  F33E11.1a
Length (nt)  1116   Chromosome Location  V: 320357-320494
Chromosome . Primary Identifier  V Chromosome Location . Start  320357
Chromosome Location . End  320494
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33E11.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17759 NHR-15, isoform a 42.9 371 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00046210
WBRNAi00014248
WBRNAi00031720

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F33E11.1a 320357 320494 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003614 nhr-15 F33E11.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F33E11.1a 320357 320494 1
CDS:F33E11.1a 321203 321314 1
CDS:F33E11.1a 321889 322253 1
CDS:F33E11.1a 322305 322426 1
CDS:F33E11.1a 322479 322603 1
CDS:F33E11.1a 323375 323628 1

1 Sequence

Length
1116

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F33E11.1a.1 F33E11.1a.1 1291   V: 312721-323650
Transcript:F33E11.1a.2 F33E11.1a.2 2086   V: 319406-323647